Scrubs didn't film a whole lot outside of the studio, but if they did, I will try to include them all here.
It should be noted that I will use the city locations of "Valley Village", "Sherman Oaks", "Studio City" and "North Hollywood" interchangeably as a good portion of these locations all lie within the same general vicinity. Also, the location of Sacred Heart is pretty well known...I have included it here for completeness...is that a word?
The Hospitals
Pilot Exterior
Women's and Children's Hospital
1240 N. Mission Rd, Los Angeles CA
Bing Aerial View
Sacred Heart Hospital
North Hollywood Medical Center
12629 Riverside, North Hollywood CA
Google Street View
Elliot's Hospital - Season 5
Valley Presbyterian Hospital
15107 Vanowen St, Van Nuys CA
Bing Aerial View
Teaching Hospital - Season 9
Culver Studios
9336 Washington Blvd, Culver City CA
Bing Aerial View
Season One
Turk and JD Go to the Strip Club - Episode 8
13632 Moorpark St, Sherman Oaks CA
Google Street View
Turk and JD's Billboard - Episode 8
Google Street View
Carla Bus Stop in the Rain - Episode 10
Riverside, Just East of Whitsett, Sherman Oaks CA
Google Street View
Carla and Kelso's Coffee Stand - Episode 14
Google Street View
The Bowling Alley - Episode 15
Sports Center Bowling, 12655 Ventura Blvd, Studio City CA
Turk and JD's Apartment Exterior - Episode 16
1305 Ingraham St, Los Angeles CA
Google Street View
Elliot and Sean's Date - Episode 21
El Portal Theatre, 5269 Lankershim Blvd, North Hollywood CA
Google Street View
Season Two
JD and Turk walking to work/Coffee Stand - Episode 1
12131 Riverside Drive, Valley Village CA
Google Street View
JD and Elliot have lunch with Dan - Episode 6
Hugo's, 12851 Riverside Dr, Studio City CA
Google Street View
JD and Elliot's Jump from Bridge - Episode 7
Colorado Street Bridge, Pasadena CA
Bing Aerial View
JD and Turk Run Into Kelso at Movie Theater - Episode 12
El Portal Theatre, 5269 Lankershim Blvd, North Hollywood CA
Google Street View
Turk Proposing to Carla on Car Roof - Episode 15
La Maida and Riverside, Sherman Oaks CA
Google Street View
Turk and Jenny at Bus Stop - Episode 15
Moorpark St, Just East of Laurel Canyon, Studio City CA
Google Street View
Turk Proposes to Carla in Park - Episode 15
Moorpark Park, 12061 Moorpark Street, Studio City CA
Google Street View
JD's Date with Jamie - Episode 18
Hugo's Restaurant, 12851 Riverside Dr, Studio City CA
Google Street View
Season Three
Elliot Runs into Sean at Juice Bar - Episode 1
4314 West Riverside Drive, Burbank CA
Google Street View
Visiting Sean at Sea World - Episode 2
500 Sea World Dr, San Diego CA
JD's Fantasy About Elliott - Episode 3
Lake Balboa, 6300 Balboa Blvd, Encino CA
Bing Aerial View
Elliot Reed's Apartment - Episode 4
4424 Woodman Ave, Sherman Oaks CA
Google Street View
JD and Danni Look At Apartment - Episode 11
4424 Woodman Ave, Sherman Oaks CA
Google Street View
Turk Arriving at Wrong Wedding/Turk and Carla's Wedding - Episode 22
Park Plaza Hotel, 607 South Park View Street, Los Angeles CA
Google Street View
Season Four
Malik Blows Up - Episode 1
Riverside, Just East of Whitsett, Sherman Oaks CA
Google Street View
Turk Picking Up Carla's Parents from Airport - Episode 1
La Maida St, Sherman Oaks CA
Google Street View
JD Helping Movers - Episode 2
12730 La Maida St, Sherman Oaks CA
Google Street View
JD Apologizes to Turk in Park - Episode 3
Studio City Recreation Center, 12621 Rye St, Studio City CA
Bing Aerial View
Molly Clock's Apartment - Episode 8
New York St, Universal Studios Hollywood Backlot, Universal City CA
Bing Aerial View
You can see a picture of it on Flickr here
Season Five
JD's Triathlon Beach - Episode 3
Leo Carrillo State Beach, Malibu CA
JD Stealing Buddha/Jack's Baptism - Episode 5
Church of the Chimes, 14115 Magnolia Blvd, Sherman Oaks CA
Google Street View
JD and Julie Buy a Half-Acre - Episode 9
Lot just west of 13915 Victory Blvd, Van Nuys CA
Google Street View
Kelso Recalls Leaving Family on Bike - Episode 13
12733 La Maida St, Sherman Oaks CA
Google Street View
Janitor Hurdle Flashback - Episode 16
Van Nuys High School, 6535 Cedros Ave, Van Nuys CA
Bing Aerial View
Season Six
Laverne's Funeral - Episode 16
Church of the Chimes, 14115 Magnolia Blvd, Sherman Oaks CA
Google Street View
Season Seven
Coming Soon...
Season Eight
Bahamas Resort - Episode 14/15
Hope Town Harbour Lodge, Hope Town, Great Abaco Island, Bahamas